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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
2
total RNA-seq
Assay category
18
DNA binding
2
Transcription
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
3
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
16
December, 2017
4
May, 2021
Available data
20
bam
20
bigWig
18
bed narrowPeak
16
fastq
14
bigBed narrowPeak
2
tagAlign
2
tsv
Organism
20
Homo sapiens
Biosample type
225
primary cell
49
cell line
20
in vitro differentiated cells
Organ
54
connective tissue
21
embryo
20
epithelium
14
liver
2
pancreas
1
heart
Project
20
AMP
Genome assembly (visualization)
20
GRCh38
20
hg19
Lab
20
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
Audit category:
1
inconsistent control read length
BIOSAMPLE
ASSAY
20 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
14
Hepatic endoderm
2
pancreatic PP cell
2
endothelial cell
1
intermediate endothelial cell
1
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