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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
902
total RNA-seq
177
DNase-seq
158
ATAC-seq
16
WGBS
16
small RNA-seq
Assay category
918
Transcription
DNA binding
335
DNA accessibility
16
DNA methylation
Date released
452
February, 2021
163
June, 2019
143
May, 2020
116
July, 2018
94
August, 2017
64
August, 2021
61
July, 2019
39
November, 2019
38
May, 2021
35
February, 2023
15
November, 2018
14
October, 2019
12
May, 2023
8
October, 2017
7
March, 2020
6
April, 2018
2
March, 2019
Available data
1155
bam
1128
bigWig
917
tsv
319
bed narrowPeak
179
bigBed narrowPeak
177
bed broadPeak
176
bed bed3+
176
bigBed broadPeak
125
fastq
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
Organism
1269
Homo sapiens
Biosample type
1269
tissue
329
primary cell
145
in vitro differentiated cells
118
cell line
Organ
462
connective tissue
404
adipose tissue
308
pancreas
156
liver
145
kidney
85
heart
66
bone element
49
limb
48
blood vessel
48
vasculature
41
artery
38
brain
37
musculature of body
18
ureter
8
skeleton
7
nerve
4
spleen
3
eye
Project
1269
AMP
Genome assembly (visualization)
1269
GRCh38
1226
hg19
Lab
1191
AMP-T2D consortium
75
Katalin Susztak, Upenn
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
2
inconsistent ontology term
assay_slims!
DNA binding
BIOSAMPLE
ASSAY
1269 results
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Clear Filters
total RNA-seq
DNase-seq
ATAC-seq
WGBS
small RNA-seq
tissue
adipose tissue
382
2
islet of Langerhans
266
1
22
liver
147
2
1
kidney
13
75
bone tissue
58
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