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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
113
ATAC-seq
2
ChIP-seq
1
total RNA-seq
Assay category
113
DNA accessibility
2
DNA binding
1
Transcription
Target of assay
2
histone
2
histone modification
2
narrow histone mark
Date released
64
August, 2021
35
February, 2023
12
May, 2023
2
March, 2019
2
October, 2019
1
October, 2017
Available data
bam
1672
bigWig
917
tsv
843
bed narrowPeak
555
bigBed narrowPeak
280
fastq
204
bed bed3+
191
bed broadPeak
176
bigBed broadPeak
116
tagAlign
64
xls
16
bed bedMethyl
16
bigBed bedMethyl
1
tagAlign bed3+
Organism
116
Homo sapiens
Biosample type
116
tissue
11
primary cell
1
cell line
Organ
75
kidney
35
artery
35
blood vessel
35
heart
35
vasculature
3
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
116
AMP
Genome assembly (visualization)
116
GRCh38
107
hg19
Lab
75
Katalin Susztak, Upenn
38
AMP-T2D consortium
1
Bing Ren, UCSD
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bam
BIOSAMPLE
ASSAY
116 results
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ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
75
coronary artery
35
islet of Langerhans
3
adipose tissue
1
dorsal plus ventral thalamus
1
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