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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
71
ChIP-seq
58
total RNA-seq
46
ATAC-seq
1
WGBS
Assay category
71
DNA binding
58
Transcription
46
DNA accessibility
1
DNA methylation
Target of assay
64
histone
64
histone modification
41
broad histone mark
23
narrow histone mark
7
transcription factor
3
RNA binding protein
Date released
64
February, 2021
39
May, 2019
35
February, 2023
29
October, 2019
8
July, 2019
1
March, 2020
Available data
152
bam
144
bigWig
128
bed narrowPeak
78
bigBed narrowPeak
58
tsv
bed broadPeak
11
bigBed broadPeak
9
bed bed3+
4
tagAlign
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
176
Homo sapiens
Biosample type
100
tissue
64
cell line
12
primary cell
Organ
619
pancreas
554
connective tissue
479
liver
419
adipose tissue
274
epithelium
235
heart
176
blood vessel
176
vasculature
167
brain
126
kidney
124
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
18
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
176
AMP
Genome assembly (visualization)
176
GRCh38
147
hg19
Lab
176
AMP-T2D consortium
files.file_type!
bed broadPeak
assay_title!
small RNA-seq
BIOSAMPLE
ASSAY
176 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
tissue
coronary artery
3
36
tibial artery
18
1
thoracic aorta
12
2
1
ascending aorta
13
1
aorta
11
1
1
cell line
smooth muscle cell of the coronary artery
4
52
8
primary cell
endothelial cell of umbilical vein
10
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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