Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
133
ChIP-seq
89
total RNA-seq
5
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
133
DNA binding
89
Transcription
6
DNA accessibility
2
DNA methylation
Target of assay
86
histone modification
85
histone
45
narrow histone mark
45
transcription factor
39
broad histone mark
6
RNA binding protein
2
chromatin remodeller
2
control
Date released
563
February, 2021
230
August, 2017
188
May, 2020
187
May, 2021
185
November, 2017
164
July, 2018
160
October, 2019
96
May, 2019
89
August, 2021
79
July, 2019
77
December, 2017
72
September, 2018
70
November, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
23
June, 2019
16
March, 2020
12
May, 2023
7
August, 2020
7
October, 2017
7
September, 2017
5
December, 2019
5
November, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
249
bam
249
fastq
247
bigWig
118
bed narrowPeak
89
tsv
38
bigBed narrowPeak
33
bed bed3+
bed broadPeak
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
230
Homo sapiens
Biosample type
152
tissue
48
in vitro differentiated cells
30
primary cell
Organ
146
pancreas
64
connective tissue
19
liver
17
epithelium
16
adipose tissue
Project
230
AMP
Genome assembly (visualization)
234
hg19
230
GRCh38
Lab
230
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
16
inconsistent control read length
1
inconsistent assembly
1
inconsistent control run_type
files.file_type!
bed broadPeak
tagAlign
BIOSAMPLE
ASSAY
230 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
WGBS
DNase-seq
tissue
islet of Langerhans
21
89
1
liver
18
white adipose tissue
12
pancreas
6
adipose tissue
1
2
+ See 2 more…
in vitro differentiated cells
adipocyte
48
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
skeletal muscle myoblast
1
See all biosamples
Download