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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
15
total RNA-seq
6
WGBS
3
ATAC-seq
1
small RNA-seq
Assay category
106
DNA binding
16
Transcription
6
DNA methylation
3
DNA accessibility
Target of assay
94
histone
94
histone modification
57
broad histone mark
37
narrow histone mark
12
transcription factor
10
RNA binding protein
Date released
46
April, 2019
40
May, 2024
18
July, 2019
12
May, 2019
7
October, 2019
3
June, 2019
3
May, 2021
2
March, 2020
Available data
159
bigWig
137
bed narrowPeak
119
bam
89
bigBed narrowPeak
28
bed bed3+
28
bed broadPeak
bigBed broadPeak
16
tsv
6
bed bedMethyl
6
bigBed bedMethyl
Organism
131
Homo sapiens
Biosample type
125
tissue
5
primary cell
1
in vitro differentiated cells
Organ
628
pancreas
557
connective tissue
482
liver
422
adipose tissue
274
epithelium
236
heart
179
brain
176
blood vessel
176
vasculature
127
kidney
artery
66
bone element
60
limb
54
blood
54
bodily fluid
29
embryo
29
nerve
20
musculature of body
15
spleen
10
vein
8
skeleton
2
eye
1
pericardium
1
pituitary gland
Project
131
AMP
Genome assembly (visualization)
131
GRCh38
91
hg19
Lab
91
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
files.file_type!
bigBed broadPeak
organ_slims!
artery
BIOSAMPLE
ASSAY
131 results
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Clear Filters
ChIP-seq
total RNA-seq
WGBS
ATAC-seq
small RNA-seq
tissue
left cardiac atrium
40
heart left ventricle
28
3
2
2
heart
12
4
1
1
heart right ventricle
11
1
2
right atrium auricular region
7
2
1
+ See 3 more…
primary cell
cardiac fibroblast
3
cardiac atrium fibroblast
1
cardiac ventricle fibroblast
1
in vitro differentiated cells
cardiac fibroblast
1
See all biosamples
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