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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
3
ChIP-seq
1
Hi-C
Assay category
195
DNA accessibility
3
DNA binding
1
3D chromatin structure
Target of assay
3
histone
3
histone modification
2
narrow histone mark
1
broad histone mark
Date released
187
June, 2019
8
October, 2019
3
August, 2021
1
November, 2020
Available data
2959
bam
2890
bigWig
1592
bed narrowPeak
1400
tsv
998
bigBed narrowPeak
fastq
282
bed broadPeak
267
bigBed broadPeak
258
bed bed3+
246
tagAlign
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
1
tagAlign bed3+
Organism
199
Homo sapiens
Biosample type
167
tissue
30
primary cell
2
cell line
Organ
78
kidney
36
limb
33
musculature of body
30
brain
30
heart
19
epithelium
18
ureter
11
vasculature
9
blood vessel
7
connective tissue
6
pancreas
5
liver
4
artery
4
eye
2
nerve
2
vein
1
adipose tissue
Project
199
AMP
Genome assembly (visualization)
199
GRCh38
191
hg19
Lab
199
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
1
inconsistent assembly
files.file_type!
fastq
BIOSAMPLE
ASSAY
199 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 36 more…
primary cell
hepatocyte
1
3
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 17 more…
cell line
Panc1
1
1
See all biosamples
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