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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
195
DNase-seq
5
ChIP-seq
Assay category
195
DNA accessibility
5
DNA binding
Target of assay
5
histone
5
histone modification
3
narrow histone mark
2
broad histone mark
Date released
187
June, 2019
7
October, 2019
5
November, 2017
1
November, 2020
Available data
2959
bam
2890
bigWig
1592
bed narrowPeak
1400
tsv
998
bigBed narrowPeak
fastq
282
bed broadPeak
267
bigBed broadPeak
258
bed bed3+
246
tagAlign
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
1
tagAlign bed3+
Organism
200
Homo sapiens
Biosample type
172
tissue
27
primary cell
1
cell line
Organ
78
kidney
36
limb
35
brain
33
musculature of body
30
heart
18
ureter
16
epithelium
11
vasculature
9
blood vessel
7
connective tissue
5
pancreas
4
artery
4
eye
2
liver
2
nerve
2
vein
1
adipose tissue
Project
200
AMP
Genome assembly (visualization)
200
GRCh38
200
hg19
Lab
200
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
200 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
+ See 39 more…
primary cell
cardiac fibroblast
3
endothelial cell of umbilical vein
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 17 more…
cell line
Panc1
1
See all biosamples
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