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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
1
WGBS
Assay category
47
DNA binding
44
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
5
May, 2019
1
July, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
96
Homo sapiens
Biosample type
96
tissue
Organ
491
connective tissue
401
adipose tissue
278
pancreas
226
heart
205
kidney
202
brain
188
liver
187
vasculature
185
blood vessel
128
artery
113
epithelium
96
limb
66
bone element
53
musculature of body
31
nerve
18
ureter
12
vein
10
embryo
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
96
AMP
Genome assembly (visualization)
96
GRCh38
96
hg19
Lab
96
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
fastq
BIOSAMPLE
ASSAY
96 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
WGBS
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
distal epiphysis of femur
1
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