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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
11
ChIP-seq
8
DNase-seq
Assay category
11
DNA binding
8
DNA accessibility
Target of assay
10
transcription factor
1
control
Date released
11
August, 2017
6
June, 2019
1
November, 2018
1
November, 2020
Available data
565
bam
562
bigWig
474
tsv
75
fastq
71
bed narrowPeak
25
bigBed narrowPeak
19
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
Organism
19
Homo sapiens
Biosample type
7
in vitro differentiated cells
6
primary cell
6
tissue
Organ
78
kidney
36
limb
33
musculature of body
32
brain
30
heart
29
pancreas
19
connective tissue
19
epithelium
18
ureter
11
liver
11
vasculature
9
blood vessel
6
adipose tissue
4
artery
4
eye
3
embryo
2
nerve
2
vein
1
spleen
Project
19
AMP
Genome assembly (visualization)
26
hg19
19
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
4
inconsistent control read length
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
DNase-seq
in vitro differentiated cells
adipocyte
7
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
white adipose tissue
4
omental fat pad
2
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