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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
1
DNase-seq
Assay category
18
DNA binding
1
DNA accessibility
Target of assay
17
histone
17
histone modification
10
broad histone mark
7
narrow histone mark
1
RNA binding protein
1
chromatin remodeller
1
transcription factor
Date released
187
June, 2019
55
November, 2017
19
August, 2017
9
November, 2018
7
October, 2019
4
October, 2017
1
November, 2020
Available data
249
bam
249
fastq
247
bigWig
118
bed narrowPeak
89
tsv
38
bigBed narrowPeak
33
bed bed3+
19
bed broadPeak
17
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
13
Homo sapiens
Biosample type
12
primary cell
6
tissue
1
in vitro differentiated cells
Organ
6
pancreas
1
connective tissue
Project
19
AMP
Genome assembly (visualization)
41
hg19
19
GRCh38
Lab
19
AMP-T2D consortium
Audit category:
2
inconsistent assembly
BIOSAMPLE
ASSAY
19 results
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ChIP-seq
DNase-seq
primary cell
skeletal muscle myoblast
12
tissue
pancreas
6
in vitro differentiated cells
adipocyte
1
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