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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
106
single cell RNA-seq
18
small RNA-seq
Assay category
124
Transcription
Target of assay
3
control
Date released
49
April, 2018
48
July, 2018
21
July, 2019
3
August, 2018
3
June, 2018
Available data
1683
bam
1654
bigWig
1632
bed narrowPeak
998
bigBed narrowPeak
812
fastq
282
bed broadPeak
267
bigBed broadPeak
258
bed bed3+
246
tagAlign
124
tsv
64
xls
17
bed bedMethyl
17
bigBed bedMethyl
2
bed bed3
1
hdf5
1
hic
1
tagAlign bed3+
Organism
124
Homo sapiens
Biosample type
102
primary cell
22
tissue
Organ
82
pancreas
70
epithelium
7
brain
7
connective tissue
3
adipose tissue
3
liver
2
musculature of body
1
heart
1
kidney
Project
124
AMP
Genome assembly (visualization)
126
hg19
124
GRCh38
Lab
124
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
124 results
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single cell RNA-seq
small RNA-seq
primary cell
pancreatic acinar cell
12
pancreatic alpha cell
12
pancreatic beta cell
12
pancreatic delta cell
11
pancreatic ductal cell
10
+ See 15 more…
tissue
islet of Langerhans
6
body of pancreas
2
right lobe of liver
2
cerebellum (Hemisphere)
1
diencephalon
1
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