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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
96
total RNA-seq
84
ChIP-seq
10
ATAC-seq
Assay category
96
Transcription
84
DNA binding
10
DNA accessibility
Target of assay
84
histone
84
histone modification
44
broad histone mark
40
narrow histone mark
Date released
135
May, 2021
45
May, 2020
7
August, 2020
3
September, 2020
Available data
190
bigWig
180
bam
96
tsv
84
bed narrowPeak
84
tagAlign
10
fastq
Organism
190
Homo sapiens
Biosample type
190
primary cell
Organ
10
epithelium
10
pancreas
Project
180
T1D
10
HPAP
Genome assembly (visualization)
241
hg19
190
GRCh38
Lab
2818
AMP-T2D consortium
180
Kyle Gaulton, UCSD
75
Katalin Susztak, Upenn
10
Klaus Kaestner, Upenn
1
Bing Ren, UCSD
1
ITG
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
4
inconsistent ontology term
BIOSAMPLE
ASSAY
190 results
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total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
53
84
pancreatic alpha cell
7
pancreatic beta cell
3
B cell
2
CD8-positive, alpha-beta T cell
2
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