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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
207
ChIP-seq
145
total RNA-seq
100
single cell RNA-seq
49
ATAC-seq
27
DNase-seq
2
small RNA-seq
1
Hi-C
Assay category
49
DNA accessibility
Date released
14
September, 2018
13
May, 2021
7
August, 2020
5
September, 2017
3
August, 2017
3
September, 2020
2
October, 2019
1
February, 2021
1
November, 2020
Available data
39
bam
39
bed narrowPeak
33
bigWig
32
fastq
22
bigBed narrowPeak
1
bed bed3
Organism
49
Homo sapiens
Biosample type
158
tissue
49
primary cell
17
in vitro differentiated cells
10
cell line
Organ
33
epithelium
32
pancreas
2
connective tissue
1
liver
Project
39
AMP
10
HPAP
Genome assembly (visualization)
84
hg19
49
GRCh38
Lab
39
AMP-T2D consortium
10
Klaus Kaestner, Upenn
Audit category:
2
inconsistent ontology term
month_released!
December, 2019
BIOSAMPLE
ASSAY
49 results
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ATAC-seq
primary cell
monocyte
13
pancreatic alpha cell
13
pancreatic beta cell
10
pancreatic acinar cell
5
pancreatic ductal cell
4
osteoblast
2
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
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