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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
47
DNA binding
38
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
5
May, 2019
1
July, 2019
Available data
90
bam
90
bigWig
85
bed narrowPeak
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
564
connective tissue
531
liver
482
pancreas
424
adipose tissue
266
heart
261
epithelium
217
brain
205
kidney
191
vasculature
187
blood vessel
128
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2018
organ_slims!
skeleton
BIOSAMPLE
ASSAY
90 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
forelimb muscle
1
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