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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
44
total RNA-seq
18
small RNA-seq
8
WGBS
6
ATAC-seq
3
single cell RNA-seq
Assay category
65
Transcription
64
DNA binding
8
DNA methylation
6
DNA accessibility
Target of assay
59
histone
59
histone modification
37
broad histone mark
22
narrow histone mark
5
transcription factor
3
RNA binding protein
3
control
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
143
bam
143
bigWig
69
bed narrowPeak
65
tsv
64
bigBed narrowPeak
8
bed bedMethyl
8
bigBed bedMethyl
Organism
143
Homo sapiens
Biosample type
125
tissue
18
primary cell
Organ
67
heart
24
kidney
16
connective tissue
12
adipose tissue
12
brain
8
blood vessel
8
vasculature
7
liver
5
epithelium
5
musculature of body
4
pancreas
3
artery
1
limb
1
pericardium
Project
143
AMP
Genome assembly (visualization)
156
hg19
143
GRCh38
Lab
143
AMP-T2D consortium
BIOSAMPLE
ASSAY
143 results
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ChIP-seq
total RNA-seq
small RNA-seq
WGBS
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
28
2
2
2
kidney
18
heart right ventricle
11
2
heart
7
2
1
1
omental fat pad
4
1
+ See 21 more…
primary cell
cerebellar granule cell
2
mesenchymal stem cell of adipose
1
1
skeletal muscle satellite cell
1
1
Purkinje cell
1
cardiac atrium fibroblast
1
+ See 10 more…
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