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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
90
ChIP-seq
4
ATAC-seq
1
DNase-seq
Assay category
90
DNA binding
Transcription
5
DNA accessibility
Target of assay
77
histone modification
76
histone
39
narrow histone mark
37
broad histone mark
12
transcription factor
3
RNA binding protein
1
chromatin remodeller
1
control
Date released
280
November, 2017
195
June, 2019
191
October, 2019
103
May, 2021
96
May, 2019
95
August, 2017
90
August, 2021
78
November, 2018
77
December, 2017
64
April, 2019
46
September, 2018
40
May, 2024
40
October, 2018
36
November, 2019
35
February, 2023
30
December, 2018
22
February, 2021
21
January, 2019
19
May, 2020
16
February, 2018
14
July, 2019
13
October, 2017
11
May, 2023
7
August, 2020
7
September, 2017
3
March, 2020
3
September, 2020
2
March, 2019
1
March, 2023
Available data
95
bam
95
fastq
94
bigWig
73
bed narrowPeak
35
bigBed narrowPeak
22
bed bed3+
18
bed broadPeak
17
tagAlign
12
bigBed broadPeak
Organism
89
Homo sapiens
Biosample type
53
tissue
42
primary cell
Organ
connective tissue
63
pancreas
19
liver
17
epithelium
16
adipose tissue
Project
95
AMP
Genome assembly (visualization)
123
hg19
95
GRCh38
Lab
95
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
10
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
assay_slims!
Transcription
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
21
1
liver
18
pancreas
12
right lobe of liver
1
primary cell
skeletal muscle myoblast
13
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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