Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
89
total RNA-seq
2
WGBS
Assay category
120
DNA binding
89
Transcription
2
DNA methylation
Target of assay
73
histone modification
72
histone
45
transcription factor
40
narrow histone mark
31
broad histone mark
6
RNA binding protein
2
chromatin remodeller
2
control
Date released
568
February, 2021
276
May, 2021
211
August, 2017
207
May, 2020
164
July, 2018
141
October, 2019
105
August, 2021
79
July, 2019
58
September, 2018
57
November, 2019
49
April, 2018
35
February, 2023
31
February, 2018
27
December, 2017
16
March, 2020
12
May, 2023
8
October, 2017
7
August, 2020
7
November, 2018
5
December, 2019
5
January, 2019
5
November, 2020
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
2
October, 2018
2
September, 2017
1
March, 2023
Available data
249
bam
249
fastq
247
bigWig
118
bed narrowPeak
89
tsv
bigBed narrowPeak
33
bed bed3+
19
bed broadPeak
17
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
211
Homo sapiens
Biosample type
137
tissue
48
in vitro differentiated cells
26
primary cell
Organ
136
pancreas
62
connective tissue
14
adipose tissue
14
epithelium
13
liver
Project
211
AMP
Genome assembly (visualization)
234
hg19
211
GRCh38
Lab
211
AMP-T2D consortium
Audit category:
39
missing controlled_by
Audit category:
10
inconsistent control read length
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
211 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
WGBS
tissue
islet of Langerhans
21
89
liver
13
white adipose tissue
12
adipose tissue
2
in vitro differentiated cells
adipocyte
48
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
pancreatic beta cell
7
Download