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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
156
ChIP-seq
5
ATAC-seq
2
DNase-seq
Assay category
156
DNA binding
7
DNA accessibility
Target of assay
118
histone modification
117
histone
63
broad histone mark
53
narrow histone mark
38
transcription factor
17
RNA binding protein
3
chromatin remodeller
Date released
280
November, 2017
210
June, 2019
188
October, 2019
118
August, 2017
103
May, 2021
96
May, 2019
90
August, 2021
72
December, 2017
72
November, 2018
64
April, 2019
46
September, 2018
45
October, 2018
40
May, 2024
37
November, 2019
35
February, 2023
30
December, 2018
23
February, 2021
21
January, 2019
19
May, 2020
16
February, 2018
12
October, 2017
5
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
296
bam
294
bigWig
282
fastq
163
bed narrowPeak
91
tsv
83
bigBed narrowPeak
33
bed bed3+
19
bed broadPeak
17
tagAlign
13
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
157
Homo sapiens
Biosample type
90
tissue
43
in vitro differentiated cells
30
primary cell
Organ
82
pancreas
50
connective tissue
18
liver
17
epithelium
7
adipose tissue
Project
163
AMP
Genome assembly (visualization)
187
hg19
163
GRCh38
Lab
163
AMP-T2D consortium
Audit category:
1
missing controlled_by
Audit category:
17
inconsistent control read length
3
inconsistent assembly
1
inconsistent control run_type
BIOSAMPLE
ASSAY
163 results
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Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
body of pancreas
25
liver
17
endocrine pancreas
14
islet of Langerhans
12
1
pancreas
13
+ See 4 more…
in vitro differentiated cells
adipocyte
42
1
primary cell
skeletal muscle myoblast
13
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
See all biosamples
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