Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
92
ChIP-seq
2
ATAC-seq
2
WGBS
1
DNase-seq
Assay category
92
DNA binding
3
DNA accessibility
2
DNA methylation
Target of assay
51
histone modification
50
histone
39
transcription factor
25
broad histone mark
24
narrow histone mark
5
RNA binding protein
3
chromatin remodeller
2
control
Date released
542
February, 2021
280
November, 2017
233
May, 2021
207
May, 2020
206
June, 2019
199
October, 2019
105
August, 2021
97
August, 2017
95
May, 2019
77
December, 2017
75
July, 2019
73
November, 2018
64
April, 2019
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
12
May, 2023
11
July, 2018
10
April, 2018
10
March, 2020
9
October, 2017
6
November, 2019
6
November, 2020
5
December, 2019
5
October, 2018
2
June, 2018
1
March, 2023
Available data
97
bam
97
fastq
95
bigWig
76
bed narrowPeak
22
bigBed narrowPeak
14
bed bed3+
13
bed broadPeak
13
bigBed broadPeak
11
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
Organism
97
Homo sapiens
Biosample type
49
in vitro differentiated cells
35
tissue
13
primary cell
Organ
pancreas
65
connective tissue
19
liver
17
epithelium
16
adipose tissue
Project
97
AMP
Genome assembly (visualization)
117
hg19
97
GRCh38
Lab
97
AMP-T2D consortium
Audit category:
17
missing controlled_by
Audit category:
8
inconsistent control read length
2
inconsistent assembly
1
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
97 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
WGBS
DNase-seq
in vitro differentiated cells
adipocyte
48
1
tissue
liver
18
white adipose tissue
12
adipose tissue
1
2
right lobe of liver
1
subcutaneous adipose tissue
1
primary cell
skeletal muscle myoblast
13
Download