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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
59
ChIP-seq
3
ATAC-seq
1
DNase-seq
Assay category
89
Transcription
59
DNA binding
4
DNA accessibility
Target of assay
52
histone
52
histone modification
28
narrow histone mark
24
broad histone mark
7
transcription factor
2
RNA binding protein
Date released
153
July, 2018
152
August, 2017
72
September, 2018
51
November, 2019
43
May, 2021
42
October, 2018
39
April, 2018
26
February, 2021
8
October, 2019
7
August, 2020
7
September, 2017
6
March, 2020
6
November, 2018
5
October, 2017
4
July, 2019
4
June, 2019
3
August, 2018
3
September, 2020
2
March, 2019
1
June, 2018
1
May, 2019
Available data
152
bam
152
bigWig
152
fastq
89
tsv
42
bed narrowPeak
19
bed bed3+
16
bigBed narrowPeak
6
bed broadPeak
6
tagAlign
Organism
146
Homo sapiens
Biosample type
123
tissue
29
primary cell
Organ
152
pancreas
65
connective tissue
19
liver
17
epithelium
16
adipose tissue
Project
152
AMP
Genome assembly (visualization)
159
hg19
152
GRCh38
Lab
152
AMP-T2D consortium
Audit category:
22
missing controlled_by
Audit category:
8
inconsistent control read length
1
inconsistent assembly
BIOSAMPLE
ASSAY
152 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
tissue
islet of Langerhans
89
21
1
pancreas
12
primary cell
pancreatic endocrine cell
12
pancreatic alpha cell
7
1
pancreatic beta cell
7
1
pancreatic acinar cell
1
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