Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
75
ATAC-seq
19
total RNA-seq
16
ChIP-seq
1
DNase-seq
Assay category
76
DNA accessibility
19
Transcription
16
DNA binding
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
92
bed narrowPeak
64
xls
47
bam
36
bigWig
19
tsv
16
tagAlign
4
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
111
Homo sapiens
Biosample type
64
tissue
30
in vitro differentiated cells
9
primary cell
8
cell line
Organ
64
kidney
8
embryo
6
connective tissue
3
epithelium
3
liver
Project
111
AMP
Genome assembly (visualization)
111
GRCh38
66
hg19
Lab
64
Katalin Susztak, Upenn
47
AMP-T2D consortium
BIOSAMPLE
ASSAY
111 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
DNase-seq
tissue
kidney
64
in vitro differentiated cells
neural progenitor cell
10
7
13
primary cell
osteoblast
1
4
1
hepatocyte
3
cell line
H1-hESC
8
Download