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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
170
total RNA-seq
90
ChIP-seq
13
ATAC-seq
Assay category
170
Transcription
90
DNA binding
13
DNA accessibility
Target of assay
86
histone
86
histone modification
44
broad histone mark
42
narrow histone mark
4
transcription factor
Date released
504
February, 2021
280
November, 2017
273
May, 2021
249
August, 2017
207
May, 2020
200
October, 2019
177
June, 2019
164
July, 2018
105
August, 2021
81
May, 2019
79
November, 2018
77
December, 2017
72
September, 2018
58
July, 2019
57
November, 2019
49
April, 2018
47
October, 2018
31
February, 2018
30
December, 2018
26
January, 2019
18
April, 2019
14
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
273
bam
260
bigWig
170
tsv
103
bed narrowPeak
89
tagAlign
Organism
273
Homo sapiens
Biosample type
149
primary cell
83
in vitro differentiated cells
36
tissue
5
cell line
Organ
43
pancreas
9
epithelium
heart
2
embryo
1
connective tissue
Project
137
AMP
136
T1D
Genome assembly (visualization)
313
hg19
273
GRCh38
Lab
138
AMP-T2D consortium
135
Kyle Gaulton, UCSD
Audit category:
73
inconsistent ontology term
organ_slims!
heart
BIOSAMPLE
ASSAY
273 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
primary cell
monocyte
51
84
13
embryonic stem cell
1
in vitro differentiated cells
cardiomyocytes
59
3
induced pluripotent stem cell
9
pancreatic PP cell
2
cardiomyocytes (cardiac muscle cell)
1
endothelial cell
1
+ See 8 more…
tissue
islet of Langerhans
36
cell line
EndoC_BH1
4
1
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