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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
301
ChIP-seq
5
total RNA-seq
Assay category
301
DNA binding
5
Transcription
Target of assay
218
transcription factor
80
histone
80
histone modification
66
recombinant protein
49
broad histone mark
37
RNA binding protein
31
narrow histone mark
19
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
March, 2019
1
March, 2023
Available data
306
bam
305
bigWig
301
bed narrowPeak
301
bigBed narrowPeak
249
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
5
tsv
Organism
306
Homo sapiens
Biosample type
237
cell line
63
tissue
6
primary cell
Organ
222
liver
63
brain
15
blood
15
bodily fluid
6
spleen
4
epithelium
4
vasculature
2
blood vessel
Project
306
AMP
Genome assembly (visualization)
307
hg19
306
GRCh38
Lab
306
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
17
inconsistent control read length
2
inconsistent control run_type
month_released!
March, 2019
BIOSAMPLE
ASSAY
306 results
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Clear Filters
ChIP-seq
total RNA-seq
cell line
HepG2
217
5
GM12878
15
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 2 more…
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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