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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
280
ChIP-seq
43
single cell RNA-seq
11
total RNA-seq
Assay category
280
DNA binding
54
Transcription
Target of assay
204
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
31
RNA binding protein
28
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
334
bam
333
bigWig
280
bed narrowPeak
280
bigBed narrowPeak
267
fastq
55
bed broadPeak
54
tagAlign
54
tsv
50
bigBed broadPeak
Organism
334
Homo sapiens
Biosample type
217
cell line
63
tissue
54
primary cell
Organ
222
liver
63
brain
42
epithelium
39
pancreas
4
vasculature
2
blood vessel
2
connective tissue
Project
334
AMP
Genome assembly (visualization)
335
hg19
334
GRCh38
Lab
334
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
17
inconsistent control read length
2
inconsistent control run_type
BIOSAMPLE
ASSAY
334 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
cell line
HepG2
217
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 2 more…
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
hepatocyte
5
+ See 9 more…
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