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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
280
ChIP-seq
41
single cell RNA-seq
6
total RNA-seq
Assay category
280
DNA binding
47
Transcription
Target of assay
204
transcription factor
73
histone
73
histone modification
66
recombinant protein
45
broad histone mark
31
RNA binding protein
28
narrow histone mark
13
chromatin remodeller
2
other context
2
other post-translational modification
Date released
280
November, 2017
275
May, 2021
207
May, 2020
207
October, 2019
195
June, 2019
184
August, 2017
162
July, 2018
118
February, 2021
105
August, 2021
96
May, 2019
78
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
63
July, 2019
56
November, 2019
47
April, 2018
42
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
13
October, 2017
11
May, 2023
7
August, 2020
7
September, 2017
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
327
bam
326
bigWig
280
bed narrowPeak
280
bigBed narrowPeak
266
fastq
55
bed broadPeak
54
tagAlign
50
bigBed broadPeak
47
tsv
Organism
327
Homo sapiens
Biosample type
217
cell line
63
tissue
47
primary cell
Organ
217
liver
63
brain
39
pancreas
37
epithelium
4
vasculature
2
blood vessel
connective tissue
Project
327
AMP
Genome assembly (visualization)
328
hg19
327
GRCh38
Lab
327
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
17
inconsistent control read length
2
inconsistent control run_type
organ_slims!
connective tissue
BIOSAMPLE
ASSAY
327 results
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Clear Filters
ChIP-seq
single cell RNA-seq
total RNA-seq
cell line
HepG2
217
tissue
layer of hippocampus
16
caudate nucleus
12
middle frontal area 46
11
substantia nigra
11
cingulate gyrus
6
+ See 2 more…
primary cell
pancreatic delta cell
7
pancreatic acinar cell
6
pancreatic ductal cell
6
pancreatic polypeptide-secreting cell
6
mesenchymal cell
5
+ See 7 more…
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