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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
3
DNase-seq
3
total RNA-seq
1
ATAC-seq
Assay category
20
DNA binding
4
DNA accessibility
3
Transcription
Target of assay
18
histone
18
histone modification
10
narrow histone mark
8
broad histone mark
2
RNA binding protein
2
transcription factor
Date released
61
September, 2018
33
April, 2018
33
July, 2018
26
February, 2021
23
October, 2019
18
June, 2019
17
August, 2017
16
December, 2017
13
November, 2019
9
May, 2021
7
August, 2020
5
December, 2019
5
July, 2019
5
September, 2017
4
May, 2019
4
November, 2017
3
August, 2018
3
August, 2021
3
March, 2020
3
September, 2020
2
October, 2018
1
June, 2018
Available data
27
bam
26
bigWig
24
bed narrowPeak
17
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
4
fastq
3
tsv
2
bed bed3+
Organism
27
Homo sapiens
Biosample type
25
primary cell
2
cell line
Organ
224
liver
141
brain
52
limb
37
vasculature
35
blood vessel
31
nerve
27
epithelium
22
kidney
21
artery
12
vein
8
pancreas
7
heart
1
pituitary gland
Project
27
AMP
Genome assembly (visualization)
33
hg19
27
GRCh38
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
primary cell
endothelial cell of umbilical vein
10
2
epithelial cell of proximal tubule
6
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
Liver fetal (hepatocyte)
1
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cell line
glomerular visceral epithelial cell
1
1
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