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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
ChIP-seq
9
DNase-seq
7
WGBS
5
total RNA-seq
Assay category
84
DNA binding
9
DNA accessibility
7
DNA methylation
5
Transcription
Target of assay
77
transcription factor
27
RNA binding protein
15
recombinant protein
13
chromatin remodeller
7
histone
7
histone modification
4
broad histone mark
3
narrow histone mark
3
other context
3
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
40
May, 2024
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
105
bam
105
bigWig
105
fastq
93
bed narrowPeak
93
bigBed narrowPeak
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
5
tsv
Organism
105
Homo sapiens
Biosample type
77
cell line
28
tissue
Organ
57
liver
27
blood
27
bodily fluid
12
spleen
6
pancreas
2
brain
1
adipose tissue
1
connective tissue
Project
105
AMP
Genome assembly (visualization)
105
GRCh38
97
hg19
Lab
105
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
month_released!
August, 2020
BIOSAMPLE
ASSAY
105 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
total RNA-seq
cell line
HepG2
44
1
5
GM12878
27
tissue
spleen
9
1
2
liver
4
2
body of pancreas
2
2
brain
2
pancreas
2
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