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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
159
ChIP-seq
9
DNase-seq
7
WGBS
Assay category
159
DNA binding
9
DNA accessibility
7
DNA methylation
Target of assay
91
histone
91
histone modification
68
transcription factor
58
broad histone mark
33
narrow histone mark
26
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
175
bam
175
bigWig
168
bed narrowPeak
168
bigBed narrowPeak
79
fastq
9
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
175
Homo sapiens
Biosample type
114
tissue
57
cell line
4
primary cell
Organ
52
liver
39
blood vessel
39
vasculature
27
brain
15
heart
12
blood
12
bodily fluid
7
pancreas
6
spleen
5
limb
5
musculature of body
4
epithelium
4
kidney
3
artery
1
adipose tissue
1
connective tissue
Project
175
AMP
Genome assembly (visualization)
175
GRCh38
168
hg19
Lab
175
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
175 results
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Clear Filters
ChIP-seq
DNase-seq
WGBS
tissue
ascending aorta
13
temporal lobe
13
angular gyrus
12
thoracic aorta
12
aorta
11
+ See 12 more…
cell line
HepG2
44
1
GM12878
12
primary cell
kidney epithelial cell
4
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