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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ATAC-seq
20
total RNA-seq
17
ChIP-seq
Assay category
34
DNA accessibility
20
Transcription
17
DNA binding
Target of assay
16
histone
16
histone modification
11
broad histone mark
5
narrow histone mark
1
RNA binding protein
1
transcription factor
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
70
bam
49
bed narrowPeak
45
bigWig
20
tsv
14
fastq
6
bigBed narrowPeak
6
tagAlign
4
bed broadPeak
Organism
71
Homo sapiens
Biosample type
53
tissue
13
cell line
5
in vitro differentiated cells
Organ
56
pancreas
13
epithelium
7
brain
2
adipose tissue
2
connective tissue
1
spleen
Project
71
AMP
Genome assembly (visualization)
72
hg19
71
GRCh38
Lab
70
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
19
inconsistent ontology term
Audit category:
3
missing controlled_by
BIOSAMPLE
ASSAY
71 results
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Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
tissue
islet of Langerhans
20
19
brain
6
body of pancreas
4
adipose tissue(adipose white tissue)
1
cerebellum (Hemisphere)
1
+ See 2 more…
cell line
EndoC_BH1
1
1
11
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
See all biosamples
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