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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
79
ATAC-seq
18
ChIP-seq
15
total RNA-seq
Assay category
79
DNA accessibility
18
DNA binding
15
Transcription
Target of assay
16
histone
16
histone modification
9
narrow histone mark
7
broad histone mark
2
control
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
95
bed narrowPeak
64
xls
48
bam
36
bigWig
16
tagAlign
15
tsv
7
fastq
5
bed bed3+
5
bigBed narrowPeak
Organism
112
Homo sapiens
Biosample type
66
tissue
30
in vitro differentiated cells
8
cell line
8
primary cell
Organ
64
kidney
8
embryo
8
epithelium
7
pancreas
3
liver
Project
112
AMP
Genome assembly (visualization)
112
GRCh38
67
hg19
Lab
64
Katalin Susztak, Upenn
48
AMP-T2D consortium
BIOSAMPLE
ASSAY
112 results
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Clear Filters
ATAC-seq
ChIP-seq
total RNA-seq
tissue
kidney
64
islet of Langerhans
2
in vitro differentiated cells
neural progenitor cell
10
13
7
cell line
H1-hESC
8
primary cell
hepatocyte
3
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
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