Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
65
ChIP-seq
9
DNase-seq
7
WGBS
5
ATAC-seq
Assay category
65
DNA binding
14
DNA accessibility
7
DNA methylation
Target of assay
63
transcription factor
21
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
2
control
Date released
568
February, 2021
280
November, 2017
276
May, 2021
249
August, 2017
210
June, 2019
207
May, 2020
207
October, 2019
164
July, 2018
105
August, 2021
96
May, 2019
79
July, 2019
79
November, 2018
77
December, 2017
72
September, 2018
64
April, 2019
57
November, 2019
49
April, 2018
47
October, 2018
35
February, 2023
31
February, 2018
30
December, 2018
26
January, 2019
16
March, 2020
14
October, 2017
12
May, 2023
7
August, 2020
7
September, 2017
6
November, 2020
5
December, 2019
3
August, 2018
3
June, 2018
3
September, 2020
2
March, 2019
1
March, 2023
Available data
86
bam
86
fastq
84
bigWig
77
bed narrowPeak
77
bigBed narrowPeak
11
bed bed3+
9
bed broadPeak
9
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
Organism
86
Homo sapiens
Biosample type
57
cell line
24
tissue
5
primary cell
Organ
52
liver
13
pancreas
12
blood
12
bodily fluid
6
spleen
5
epithelium
2
brain
1
adipose tissue
1
connective tissue
Project
86
AMP
Genome assembly (visualization)
86
GRCh38
78
hg19
Lab
86
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
BIOSAMPLE
ASSAY
86 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
cell line
HepG2
44
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
body of pancreas
2
2
brain
2
islet of Langerhans
2
+ See 3 more…
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
pancreatic acinar cell
1
See all biosamples
Download