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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
45
ATAC-seq
24
ChIP-seq
4
DNase-seq
Assay category
54
Transcription
49
DNA accessibility
24
DNA binding
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
5
transcription factor
RNA binding protein
Date released
64
February, 2021
35
February, 2023
21
October, 2019
3
July, 2019
2
June, 2019
2
May, 2019
Available data
92
bam
84
bigWig
73
bed narrowPeak
54
tsv
24
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
4
tagAlign
Organism
127
Homo sapiens
Biosample type
64
cell line
61
tissue
2
primary cell
Organ
626
pancreas
556
connective tissue
480
liver
419
adipose tissue
286
epithelium
220
heart
214
brain
203
kidney
186
vasculature
183
blood vessel
127
artery
96
limb
66
bone element
53
musculature of body
44
blood
44
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
5
eye
1
pericardium
1
pituitary gland
Project
127
AMP
Genome assembly (visualization)
127
GRCh38
92
hg19
Lab
127
AMP-T2D consortium
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
127 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
cell line
smooth muscle cell of the coronary artery
52
8
4
tissue
coronary artery
36
2
2
tibial artery
1
18
2
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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