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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
48
ChIP-seq
5
DNase-seq
4
total RNA-seq
1
ATAC-seq
1
WGBS
Assay category
48
DNA binding
6
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
45
histone
45
histone modification
27
broad histone mark
18
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
36
May, 2019
12
October, 2019
5
July, 2019
3
June, 2019
2
November, 2017
1
March, 2020
Available data
59
bam
59
bigWig
54
bed narrowPeak
53
bigBed narrowPeak
7
bed broadPeak
7
bigBed broadPeak
5
bed bed3+
4
tsv
2
fastq
1
bed bedMethyl
1
bigBed bedMethyl
Organism
59
Homo sapiens
Biosample type
43
tissue
16
primary cell
Organ
635
pancreas
566
connective tissue
531
liver
424
adipose tissue
294
epithelium
226
heart
217
brain
205
kidney
191
vasculature
187
blood vessel
artery
96
limb
66
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
59
AMP
Genome assembly (visualization)
66
hg19
59
GRCh38
Lab
59
AMP-T2D consortium
organ_slims!
artery
BIOSAMPLE
ASSAY
59 results
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Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
ascending aorta
13
1
1
thoracic aorta
12
2
1
aorta
11
1
1
primary cell
endothelial cell of umbilical vein
10
2
brain microvascular endothelial cell
2
1
kidney capillary endothelial cell
1
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