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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
8
ATAC-seq
4
total RNA-seq
Assay category
47
DNA binding
44
DNA accessibility
4
Transcription
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
6
February, 2021
5
May, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
bigBed bedMethyl
Organism
95
Homo sapiens
Biosample type
95
tissue
Organ
631
pancreas
564
connective tissue
530
liver
422
adipose tissue
294
epithelium
220
heart
217
brain
205
kidney
190
vasculature
186
blood vessel
128
artery
95
limb
66
bone element
54
blood
54
bodily fluid
52
musculature of body
31
nerve
29
embryo
18
ureter
14
spleen
12
vein
8
skeleton
6
eye
1
pericardium
1
pituitary gland
Project
95
AMP
Genome assembly (visualization)
96
hg19
95
GRCh38
Lab
95
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bigBed bedMethyl
BIOSAMPLE
ASSAY
95 results
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ChIP-seq
DNase-seq
ATAC-seq
total RNA-seq
tissue
tibial nerve
24
2
1
4
tibial artery
18
2
1
muscle of leg
5
13
muscle of arm
17
distal epiphysis of femur
1
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