Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
1
WGBS
Assay category
47
DNA binding
38
DNA accessibility
4
Transcription
1
DNA methylation
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
5
May, 2019
1
July, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
90
Homo sapiens
Biosample type
90
tissue
Organ
611
pancreas
562
connective tissue
528
liver
422
adipose tissue
292
epithelium
214
brain
183
heart
148
vasculature
144
blood vessel
130
kidney
90
limb
85
artery
58
bone element
54
blood
54
bodily fluid
53
musculature of body
31
nerve
28
embryo
18
ureter
16
spleen
12
vein
6
eye
1
pericardium
1
pituitary gland
Project
90
AMP
Genome assembly (visualization)
90
GRCh38
90
hg19
Lab
90
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
BIOSAMPLE
ASSAY
90 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
WGBS
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
5
13
1
muscle of arm
17
forelimb muscle
1
+ See 1 more…
See all biosamples
Download