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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
47
ChIP-seq
36
DNase-seq
4
total RNA-seq
2
ATAC-seq
Assay category
47
DNA binding
38
DNA accessibility
4
Transcription
Target of assay
47
histone
47
histone modification
34
broad histone mark
13
narrow histone mark
Date released
52
October, 2019
32
June, 2019
5
May, 2019
Available data
96
bam
91
bed narrowPeak
90
bigWig
83
bigBed narrowPeak
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
4
tsv
bed bedMethyl
1
bigBed bedMethyl
Organism
89
Homo sapiens
Biosample type
89
tissue
Organ
607
pancreas
560
connective tissue
527
liver
420
adipose tissue
292
epithelium
217
heart
214
brain
147
vasculature
143
blood vessel
130
kidney
89
limb
85
artery
58
bone element
54
blood
54
bodily fluid
52
musculature of body
31
nerve
28
embryo
18
ureter
14
spleen
12
vein
6
eye
1
pericardium
1
pituitary gland
Project
89
AMP
Genome assembly (visualization)
90
hg19
89
GRCh38
Lab
89
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bedMethyl
BIOSAMPLE
ASSAY
89 results
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ChIP-seq
DNase-seq
total RNA-seq
ATAC-seq
tissue
tibial nerve
24
2
4
1
tibial artery
18
2
1
muscle of leg
5
13
muscle of arm
17
forelimb muscle
1
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