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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
5
ChIP-seq
3
total RNA-seq
1
WGBS
1
small RNA-seq
Assay category
32
DNA accessibility
5
DNA binding
4
Transcription
1
DNA methylation
Target of assay
5
histone
5
histone modification
4
broad histone mark
1
narrow histone mark
Date released
32
June, 2019
5
May, 2019
3
July, 2019
2
March, 2020
Available data
42
bam
42
bigWig
37
bed narrowPeak
37
bigBed narrowPeak
32
bed bed3+
32
bed broadPeak
32
bigBed broadPeak
4
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
42
Homo sapiens
Biosample type
42
tissue
primary cell
Organ
534
connective tissue
520
liver
443
pancreas
422
adipose tissue
216
heart
203
brain
177
kidney
169
blood vessel
169
vasculature
126
artery
96
limb
69
epithelium
66
bone element
54
blood
54
bodily fluid
42
musculature of body
31
nerve
29
embryo
18
ureter
16
spleen
8
skeleton
3
eye
1
pituitary gland
Project
42
AMP
Genome assembly (visualization)
61
hg19
42
GRCh38
Lab
42
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
biosample_type!
primary cell
BIOSAMPLE
ASSAY
42 results
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DNase-seq
ChIP-seq
total RNA-seq
WGBS
small RNA-seq
tissue
muscle of leg
13
5
1
muscle of arm
17
psoas muscle
2
skeletal muscle tissue
1
1
forelimb muscle
1
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