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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
293
ChIP-seq
Assay category
293
DNA binding
Target of assay
571
histone modification
570
histone
434
transcription factor
293
narrow histone mark
276
broad histone mark
88
recombinant protein
86
RNA binding protein
33
chromatin remodeller
9
control
5
other context
5
other post-translational modification
Date released
111
October, 2019
32
May, 2019
30
August, 2017
25
November, 2017
22
April, 2019
19
May, 2020
15
December, 2017
11
October, 2018
8
February, 2018
7
August, 2021
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
1
October, 2017
Available data
291
bam
291
bigWig
289
bed narrowPeak
122
bigBed narrowPeak
88
tagAlign
68
fastq
11
bed bed3+
11
bed broadPeak
5
bigBed broadPeak
1
tagAlign bed3+
Organism
291
Homo sapiens
Biosample type
236
tissue
primary cell
40
in vitro differentiated cells
16
cell line
1
stem cell
Organ
104
brain
39
liver
36
pancreas
22
heart
18
blood vessel
18
vasculature
14
epithelium
13
connective tissue
13
limb
10
kidney
8
nerve
7
embryo
6
artery
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
musculature of body
1
pituitary gland
Project
289
AMP
4
T1D
Genome assembly (visualization)
299
hg19
293
GRCh38
Lab
293
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
10
inconsistent control read length
biosample_type!
primary cell
BIOSAMPLE
ASSAY
293 results
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Clear Filters
ChIP-seq
tissue
liver
26
islet of Langerhans
10
kidney
10
heart left ventricle
8
tibial nerve
8
+ See 97 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
+ See 7 more…
cell line
EndoC_BH1
6
HepG2
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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