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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
268
ChIP-seq
Assay category
268
DNA binding
Target of assay
528
histone modification
527
histone
402
transcription factor
268
narrow histone mark
259
broad histone mark
88
recombinant protein
85
RNA binding protein
30
chromatin remodeller
5
other context
5
other post-translational modification
4
control
Date released
111
October, 2019
32
May, 2019
25
November, 2017
22
April, 2019
19
May, 2020
18
August, 2017
15
May, 2024
11
October, 2018
4
November, 2019
3
December, 2017
3
January, 2019
3
March, 2020
1
May, 2021
1
October, 2017
Available data
266
bigWig
264
bed narrowPeak
251
bam
117
bigBed narrowPeak
80
tagAlign
36
fastq
11
bed broadPeak
7
bed bed3+
5
bigBed broadPeak
1
tagAlign bed3+
Organism
266
Homo sapiens
Biosample type
251
tissue
primary cell
in vitro differentiated cells
16
cell line
1
stem cell
Organ
104
brain
37
heart
35
pancreas
34
liver
18
blood vessel
18
vasculature
13
limb
10
kidney
8
nerve
6
artery
6
epithelium
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
connective tissue
1
musculature of body
1
pituitary gland
Project
264
AMP
4
T1D
Genome assembly (visualization)
268
GRCh38
259
hg19
Lab
253
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
8
inconsistent ontology term
Audit category:
5
missing controlled_by
Audit category:
8
inconsistent control read length
biosample_type!
primary cell
in vitro differentiated cells
BIOSAMPLE
ASSAY
268 results
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Clear Filters
ChIP-seq
tissue
liver
26
left cardiac atrium
15
islet of Langerhans
10
kidney
10
heart left ventricle
8
+ See 98 more…
cell line
EndoC_BH1
6
HepG2
6
Panc1
3
GM12878
1
stem cell
hESC
1
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