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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
204
ChIP-seq
Assay category
204
DNA binding
Target of assay
441
histone modification
440
histone
439
transcription factor
235
broad histone mark
204
narrow histone mark
91
RNA binding protein
88
recombinant protein
33
chromatin remodeller
9
control
5
other context
5
other post-translational modification
Date released
37
October, 2019
30
August, 2017
22
April, 2019
22
May, 2019
19
May, 2020
15
December, 2017
15
May, 2024
11
October, 2018
8
February, 2018
7
August, 2021
6
November, 2017
4
November, 2019
3
January, 2019
3
March, 2020
2
May, 2021
Available data
204
bigWig
202
bed narrowPeak
189
bam
92
bigBed narrowPeak
67
fastq
42
tagAlign
11
bed bed3+
7
bed broadPeak
5
bigBed broadPeak
Organism
202
Homo sapiens
Biosample type
147
tissue
primary cell
40
in vitro differentiated cells
16
cell line
1
stem cell
Organ
brain
39
liver
37
heart
36
pancreas
18
blood vessel
18
vasculature
14
epithelium
13
connective tissue
13
limb
10
kidney
8
nerve
7
embryo
6
artery
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
musculature of body
1
pituitary gland
Project
200
AMP
4
T1D
Genome assembly (visualization)
210
hg19
204
GRCh38
Lab
189
AMP-T2D consortium
15
Patrick T. Ellinor, Broad
Audit category:
8
inconsistent ontology term
Audit category:
4
missing controlled_by
Audit category:
10
inconsistent control read length
biosample_type!
primary cell
organ_slims!
brain
BIOSAMPLE
ASSAY
204 results
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Clear Filters
ChIP-seq
tissue
liver
26
left cardiac atrium
15
islet of Langerhans
10
kidney
10
heart left ventricle
8
+ See 30 more…
in vitro differentiated cells
adipocyte
12
neural progenitor cell
7
hepatocyte
5
pancreatic endoderm
5
Hepatic endoderm
2
+ See 7 more…
cell line
EndoC_BH1
6
HepG2
6
Panc1
3
GM12878
1
stem cell
hESC
1
See all biosamples
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