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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
64
ChIP-seq
Assay category
64
DNA binding
Target of assay
129
histone
129
histone modification
65
broad histone mark
64
narrow histone mark
18
transcription factor
9
RNA binding protein
2
control
Date released
26
August, 2017
15
September, 2018
11
October, 2018
4
November, 2019
3
March, 2020
3
October, 2019
1
May, 2019
1
May, 2021
Available data
67
bam
67
bigWig
57
bed narrowPeak
48
fastq
19
bigBed narrowPeak
6
bed bed3+
tagAlign
2
bed broadPeak
Organism
64
Homo sapiens
Biosample type
31
primary cell
24
tissue
9
cell line
Organ
64
pancreas
61
brain
45
epithelium
39
heart
25
vasculature
24
blood vessel
17
connective tissue
16
liver
15
kidney
13
limb
8
nerve
7
embryo
6
artery
5
musculature of body
5
vein
2
spleen
1
adipose tissue
1
blood
1
bodily fluid
1
eye
Project
60
AMP
4
T1D
Genome assembly (visualization)
64
GRCh38
64
hg19
Lab
64
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
26
missing controlled_by
Audit category:
6
inconsistent control read length
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
64 results
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ChIP-seq
primary cell
pancreatic endocrine cell
12
pancreatic ductal cell
7
pancreatic acinar cell
4
pancreatic alpha cell
4
pancreatic beta cell
4
tissue
islet of Langerhans
10
body of pancreas
6
endocrine pancreas
6
pancreas
2
cell line
EndoC_BH1
6
Panc1
3
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