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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
Assay category
24
DNA binding
Target of assay
731
histone modification
730
histone
382
narrow histone mark
347
broad histone mark
244
transcription factor
69
RNA binding protein
22
recombinant protein
21
chromatin remodeller
12
control
3
other context
3
other post-translational modification
Date released
November, 2017
10
November, 2018
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
24
bam
24
bed narrowPeak
24
bigWig
24
fastq
22
bigBed narrowPeak
1
bed broadPeak
1
bigBed broadPeak
Organism
24
Homo sapiens
Biosample type
15
cell line
5
tissue
3
in vitro differentiated cells
1
primary cell
Organ
10
blood
10
bodily fluid
8
liver
3
spleen
2
connective tissue
1
epithelium
Project
24
AMP
Genome assembly (visualization)
24
GRCh38
24
hg19
Lab
24
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
2
missing controlled_by
Audit category:
7
inconsistent control read length
4
inconsistent control run_type
month_released!
November, 2017
BIOSAMPLE
ASSAY
24 results
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Clear Filters
ChIP-seq
cell line
GM12878
10
HepG2
5
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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