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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
ChIP-seq
Assay category
127
DNA binding
Target of assay
804
histone modification
803
histone
448
transcription factor
410
narrow histone mark
392
broad histone mark
100
RNA binding protein
88
recombinant protein
34
chromatin remodeller
12
control
5
other context
5
other post-translational modification
Date released
81
November, 2017
25
November, 2018
7
October, 2019
6
January, 2019
3
August, 2017
3
December, 2017
2
December, 2018
Available data
127
bam
127
bed narrowPeak
127
bigWig
120
fastq
118
bigBed narrowPeak
6
bed broadPeak
6
bigBed broadPeak
Organism
127
Homo sapiens
Biosample type
118
cell line
5
tissue
3
in vitro differentiated cells
1
primary cell
Organ
104
liver
10
blood
10
bodily fluid
7
kidney
3
spleen
2
connective tissue
1
epithelium
Project
127
AMP
Genome assembly (visualization)
127
GRCh38
126
hg19
Lab
127
AMP-T2D consortium
Audit category:
7
inconsistent ontology term
3
inconsistent control
Audit category:
4
missing controlled_by
Audit category:
13
inconsistent control read length
6
inconsistent control run_type
BIOSAMPLE
ASSAY
127 results
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ChIP-seq
cell line
HepG2
101
GM12878
10
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
tissue
spleen
3
liver
2
in vitro differentiated cells
adipocyte
2
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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