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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ChIP-seq
11
ATAC-seq
8
DNase-seq
5
Hi-C
1
FAIRE-seq
Assay category
76
DNA binding
Transcription
20
DNA accessibility
5
3D chromatin structure
Target of assay
67
histone
67
histone modification
43
broad histone mark
24
narrow histone mark
8
transcription factor
4
RNA binding protein
1
control
Date released
39
May, 2019
37
October, 2019
12
February, 2021
4
July, 2019
4
June, 2019
3
November, 2017
2
March, 2020
Available data
96
bam
93
bed narrowPeak
90
bigWig
78
bigBed narrowPeak
12
bed broadPeak
12
bigBed broadPeak
10
bed bed3+
4
tagAlign
3
fastq
3
hic
2
bedpe bed3+
2
hdf5
1
tar
Organism
101
Homo sapiens
Biosample type
66
tissue
23
primary cell
12
cell line
Organ
463
liver
252
pancreas
165
epithelium
152
brain
118
heart
117
kidney
114
connective tissue
107
vasculature
101
blood vessel
92
limb
67
musculature of body
55
blood
55
bodily fluid
39
artery
34
eye
27
adipose tissue
27
nerve
18
ureter
17
vein
15
embryo
14
spleen
12
bone element
12
skeleton
1
pericardium
1
pituitary gland
Project
101
AMP
Genome assembly (visualization)
129
GRCh38
101
hg19
Lab
101
AMP-T2D consortium
Audit category:
1
audit script error
assay_slims!
Transcription
BIOSAMPLE
ASSAY
101 results
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ChIP-seq
ATAC-seq
DNase-seq
Hi-C
FAIRE-seq
tissue
tibial artery
18
1
2
ascending aorta
13
1
thoracic aorta
12
1
aorta
11
1
coronary artery
3
1
2
primary cell
endothelial cell of umbilical vein
12
2
2
1
brain microvascular endothelial cell
3
1
1
endothelial cell of hepatic sinusoid
1
cell line
smooth muscle cell of the coronary artery
4
8
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