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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
29
ChIP-seq
3
single cell RNA-seq
Assay category
29
DNA binding
Target of assay
784
histone modification
783
histone
487
transcription factor
411
narrow histone mark
371
broad histone mark
100
RNA binding protein
85
recombinant protein
36
chromatin remodeller
29
control
5
other context
5
other post-translational modification
Date released
16
November, 2017
5
December, 2017
3
August, 2017
3
May, 2021
2
September, 2017
Available data
26
bam
26
fastq
20
bigWig
9
bed bed3+
2
tagAlign
Organism
29
Homo sapiens
Biosample type
13
cell line
7
primary cell
5
in vitro differentiated cells
3
tissue
1
stem cell
Organ
14
liver
3
brain
2
epithelium
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
embryo
Project
29
AMP
Genome assembly (visualization)
29
hg19
9
GRCh38
Lab
26
AMP-T2D consortium
3
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
29 results
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ChIP-seq
cell line
HepG2
13
primary cell
CD8-positive, alpha-beta T cell
3
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
choroid plexus epithelial cell
1
skeletal muscle myoblast
1
in vitro differentiated cells
Posterior foregut
1
adipocyte
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
tissue
islet of Langerhans
2
liver
1
stem cell
hESC
1
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