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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ChIP-seq
Assay category
81
DNA binding
Target of assay
52
histone
52
histone modification
29
transcription factor
28
narrow histone mark
24
broad histone mark
1
RNA binding protein
1
chromatin remodeller
Date released
39
August, 2017
32
September, 2018
7
November, 2017
3
October, 2017
Available data
81
bam
81
bigWig
81
fastq
43
bed narrowPeak
14
bed bed3+
10
bigBed narrowPeak
3
tagAlign
2
bed broadPeak
Organism
81
Homo sapiens
Biosample type
44
primary cell
25
tissue
7
cell line
5
in vitro differentiated cells
Organ
54
pancreas
21
epithelium
17
connective tissue
12
adipose tissue
7
liver
3
brain
Project
81
AMP
Genome assembly (visualization)
81
hg19
75
GRCh38
Lab
81
AMP-T2D consortium
Audit category:
81
missing controlled_by
Audit category:
6
inconsistent control run_type
inconsistent control read length
audit.WARNING.category!
inconsistent control read length
BIOSAMPLE
ASSAY
81 results
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ChIP-seq
primary cell
pancreatic endocrine cell
23
pancreatic ductal cell
13
pancreatic acinar cell
8
tissue
white adipose tissue
12
islet of Langerhans
10
brain
3
cell line
HepG2
7
in vitro differentiated cells
adipocyte
5
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