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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
436
ChIP-seq
Assay category
1032
Transcription
436
DNA binding
306
DNA accessibility
18
3D chromatin structure
6
DNA methylation
Target of assay
399
histone
399
histone modification
230
narrow histone mark
169
broad histone mark
37
transcription factor
9
RNA binding protein
7
recombinant protein
Date released
160
October, 2019
93
May, 2019
65
April, 2019
27
May, 2020
26
August, 2021
20
August, 2017
14
October, 2018
11
November, 2019
6
May, 2021
6
November, 2017
5
February, 2021
3
March, 2020
Available data
1047
bigWig
1020
bam
1002
bed narrowPeak
688
bigBed narrowPeak
fastq
139
tagAlign
93
bed broadPeak
58
bigBed broadPeak
50
bed bed3+
3
tar
1
tagAlign bed3+
Organism
436
Homo sapiens
Biosample type
374
tissue
primary cell
45
cell line
17
in vitro differentiated cells
Organ
108
brain
71
heart
61
blood vessel
61
vasculature
48
limb
46
liver
44
pancreas
27
kidney
25
artery
24
nerve
19
musculature of body
15
epithelium
1
adipose tissue
1
connective tissue
1
pituitary gland
Project
432
AMP
4
T1D
Genome assembly (visualization)
484
GRCh38
436
hg19
Lab
422
AMP-T2D consortium
14
Bing Ren, UCSD
Audit category:
25
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
fastq
BIOSAMPLE
ASSAY
436 results
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Clear Filters
ChIP-seq
tissue
liver
32
heart left ventricle
29
tibial nerve
24
kidney
20
tibial artery
18
+ See 95 more…
cell line
HepG2
14
EndoC_BH1
13
Panc1
6
smooth muscle cell of the coronary artery
4
RCC 7860 HIF1a re-expression
3
+ See 3 more…
in vitro differentiated cells
neural progenitor cell
12
cardiomyocytes
3
pancreatic PP cell
2
See all biosamples
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