Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
14
total RNA-seq
Assay category
15
DNA binding
14
Transcription
Target of assay
11
histone
11
histone modification
7
narrow histone mark
4
broad histone mark
3
transcription factor
1
control
Date released
10
February, 2018
9
December, 2017
8
August, 2021
2
May, 2021
Available data
29
bam
28
bigWig
19
fastq
14
bed narrowPeak
14
tsv
3
bed bed3+
Organism
29
Homo sapiens
Biosample type
21
in vitro differentiated cells
8
cell line
Organ
357
liver
299
epithelium
245
pancreas
107
connective tissue
95
vasculature
89
blood vessel
75
heart
66
artery
55
blood
55
bodily fluid
37
kidney
29
embryo
21
brain
17
vein
12
musculature of body
4
eye
2
adipose tissue
1
pericardium
Project
29
AMP
Genome assembly (visualization)
29
GRCh38
29
hg19
1
hg18
Lab
29
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
3
inconsistent control read length
biosample_type!
tissue
month_released!
May, 2020
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
in vitro differentiated cells
pancreatic endoderm
13
4
Hepatic endoderm
2
mesodermal cell (lineage marker-negative)
1
mesodermal cell (pacemaker intermediate)
1
cell line
H1-hESC
8
Download