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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
62
ChIP-seq
Assay category
62
DNA binding
Target of assay
352
transcription factor
85
recombinant protein
62
RNA binding protein
37
histone
37
histone modification
30
chromatin remodeller
19
narrow histone mark
18
broad histone mark
13
control
2
other context
2
other post-translational modification
Date released
31
November, 2017
21
November, 2018
6
January, 2019
2
December, 2018
1
August, 2021
1
November, 2019
Available data
62
bed narrowPeak
62
bigWig
61
bam
60
bigBed narrowPeak
60
fastq
4
bed broadPeak
4
bigBed broadPeak
1
tar
Organism
62
Homo sapiens
Biosample type
62
cell line
22
tissue
10
primary cell
6
in vitro differentiated cells
Organ
51
liver
10
blood
10
bodily fluid
1
epithelium
1
pancreas
Project
62
AMP
Genome assembly (visualization)
62
hg19
58
GRCh38
Lab
61
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
1
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
cell line
HepG2
51
GM12878
10
EndoC_BH1
1
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